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SRX8173257: SMRTCboBP9_50
1 PACBIO_SMRT (PacBio RS II) run: 163,482 spots, 1.5G bases, 5Gb downloads

Design: size selected
Submitted by: NEB
Study: Bacteria Genome sequencing
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Intestinal commensal bacteria can inhibit dense gut colonization by vancomycin-resistant Enterococcus faecium (VRE), a leading cause of hospital-acquired infections. A consortium of commensal bacteria containing Blautia producta BPSCSK can reverse antibiotic-induced susceptibility to VRE infection 3. Herein we demonstrate that BPSCSK reduces VRE growth by secreting a lantibiotic similar to nisin-A produced by Lactococcus lactis. Although in vitro VRE growth is inhibited by BPSCSK and L. lactis, only BPSCSK colonizes the colon and reduces VRE density in vivo. In comparison to nisin-A, the BPSCSK lantibiotic has reduced activity against intestinal commensal bacteria. In patients at high risk for VRE infection, high lantibiotic gene abundance is associated with reduced E. faecium density. In germ free mice transplanted with patient-derived feces, resistance to VRE colonization correlates with lantibiotic gene abundance. Lantibiotic-producing commensal strains of the gastrointestinal tract reduce VRE colonization and represent potential probiotic agents to reestablish resistance to VRE.
Sample:
SAMN14653269 • SRS6533471 • All experiments • All runs
Library:
Name: Parabacteroides_distasonis_Pd_BP9_50_0_1nM_ Fomenkov_Palmer_Grabovich_Revin_10_24_19_988/C03_1
Instrument: PacBio RS II
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: SINGLE
Runs: 1 run, 163,482 spots, 1.5G bases, 5Gb
Run# of Spots# of BasesSizePublished
SRR11606864163,4821.5G5Gb2020-04-24

ID:
10650490

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